Publications

Publications

Nature

September 6, 2012

An expansive human regulatory lexicon encoded in transcription factor footprints

Nature

September 6, 2012

An integrated encyclopedia of DNA elements in the human genome

Nature

September 6, 2012

The accessible chromatin landscape of the human genome

Science

September 7, 2012

Systematic Localization of Common Disease-Associated Variation in Regulatory DNA

Cell

September 28, 2012

A temporal chromatin signature in human embryonic stem cells identifies regulators of cardiac development

Cell

September 28, 2012

Foxp3 exploits a pre-existent enhancer landscape for regulatory T cell lineage specification

Cell

September 14, 2012

Circuitry and Dynamics of Human Transcription Factor Regulatory Networks

Genome Res

September 4, 2012

ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia

Genome Res

September 4, 2012

Personal and Population Genomics of Human Regulatory Variation

Genome Res

September 4, 2012

What does our genome encode?

Genome Res

September 4, 2012

Widespread plasticity in CTCF occupancy linked to DNA methylation

Proc Natl Acad Sci USA

December 26, 2012

DNA regions bound at low occupancy by transcription factors do not drive patterned reporter gene expression in Drosophila

Dev Cell

October 16, 2012

Combinatorial assembly of developmental stage-specific enhancers controls gene expression programs during human erythropoiesis

Genome Biol

August 2012

An encyclopedia of mouse DNA elements (Mouse ENCODE)

Bioinformatics

July 15, 2012

BEDOPS: high-performance genomic feature operations

Dev Biol

June 15, 2012

Zebrafish globin switching occurs in two developmental stages and is controlled by the LCR

Hum Gene The

February 10, 2012

Gammaretroviral Vector Integration Occurs Overwhelmingly Within and Near DNase Hypersensitive Sites